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  • Pharmacophore-3D

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    A common pharmacophore for epothilone and taxanes: Molecular basis for drug resistance conferred by tubulin mutations in human cancer cells
    Paraskevi Giannakakou, Rick Gussio, Eva Nogales, Kenneth Giannakakou, H. Downing, Daniel Zaharevitz, Birgit Bollbuck, George Poy, Zaharevitz, Bollbuck, Poy, Dan Sackett, K. C. Nicolaou, and Tito Fojo Sackett, Nicolaou,
    Jargon n. Nonsensical, incoherent, or meaningless
    talk.
    Pharmacophore-3D description in space of relevant groups on a molecule that interact with a receptor and are responsible for the activity Tubulin-protein found in the centrosome that assists with the formation of microtubules during the cell cycle Taxane-a type of chemical compound that prohibits cell growth by stabilizing microtubules within the cell
    Presented by Jennifer Greene and assisted by John Jara
    Paclitaxel and Docetaxel


    Known as Taxol and Taxotere, respectively Taxol Belong to the family of chemotherapeutic drugs called taxanes Occurs in very small quantities Almost completely insoluble Use carrying agent called Cremophor which is a combination of ethanol, castor oil, and saline that is taken intravenously Gives only 30 to 40% response and is used for very aggressive tumors
    Identified 3 nontaxane chemical classes of natural products:

    Marine sponge -derived Discodermolide sponge-

    CoralCoral-derived Sarcodictyins

    Soil bacteria-derived Epothilones A and B bacteria-
    1
    Taxanes
    Epothilones
    Epothilones

    Water soluble Available in large quantities Retain activity against multidrug -resistant multidrugcell lines (MDR) and tumors

    Sarcodictyins Discodermolide

    Images courtesy of Rick Gussio
    The Big Picture
    Taxane, epothilone, and sarcodictyin chemistries used to form single pharmacophore Use of human cancer cells with -tubulin mutations to demonstrate their structure activity relationships (SARs) Explanation of SARs through modeling and docking studies

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